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Intron Name: Anas_platyrhynchos_platyrhynchos_10_10084449_10085125_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10084449 - 10085125

Intron Length:

677

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTGAGCCAC

5'SS Class:

major

3'SS Sequence:

TTTTCTTTTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GACTCAC

U12 Branch Point Sequence:

GACTCACTACTC

Flanking Amino Acid:

ATPAASVFPLGGNAPKLNFG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.9

0.56

1.1

59.3

41.8

Major BPS

59.5

0.24

1.2

63.3

35.6

Major PPT

91.7

0.94

0.6

88.8

20.4

Minor 5ss

32.3

-2

33.6

41.9

Minor BPS

42.2

-0.6

50.22

40.1

Associated Gene:

Gene:

NUP62

Ensembl Gene ID:

ENSAPLG00000008575

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045508

10083388 - 10095105

11718

ENSAPLT00000008938

10084171 - 10094737

10567