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Intron Name: Anas_platyrhynchos_platyrhynchos_10_10085536_10086605_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10085536 - 10086605

Intron Length:

1070

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

GTGTTTTGTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GATTCAT

U12 Branch Point Sequence:

TTCTATGTATCC

Flanking Amino Acid:

APFSLGTQSSGLSFGSLTST

Intron Amino Acid Position:

230

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.8

0.96

0.8

78.4

29.1

Major BPS

74.4

0.61

1.2

77.7

37.1

Major PPT

78.4

0.64

76.9

42.1

Minor 5ss

28.5

-2.5

35.5

41.2

Minor BPS

45.3

-0.3

2.3

62.52

43.4

Associated Gene:

Gene:

NUP62

Ensembl Gene ID:

ENSAPLG00000008575

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045508

10083388 - 10095105

11718

ENSAPLT00000008938

10084171 - 10094737

10567