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Intron Name: Anas_platyrhynchos_platyrhynchos_10_10087282_10088324_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10087282 - 10088324

Intron Length:

1043

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAC|GTGAGTCAC

5'SS Class:

major

3'SS Sequence:

CTTCTGTTTACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTAAT

U12 Branch Point Sequence:

AAACTCTTAATG

Flanking Amino Acid:

PTSSTTTGLSLGAPSTGTTG

Intron Amino Acid Position:

310

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.6

0.56

1.3

68.4

38.7

Major BPS

0.92

0.9

86.2

29.1

Major PPT

85.2

0.79

0.8

79.2

32.9

Minor 5ss

30.4

-2.2

2.8

34.8

34.1

Minor BPS

60.3

0.19

1.3

57.27

Associated Gene:

Gene:

NUP62

Ensembl Gene ID:

ENSAPLG00000008575

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045508

10083388 - 10095105

11718

ENSAPLT00000008938

10084171 - 10094737

10567