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Intron Name: Anas_platyrhynchos_platyrhynchos_10_10088421_10089519_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10088421 - 10089519

Intron Length:

1099

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGTAGA

5'SS Class:

strong_major

3'SS Sequence:

TCTCTTCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTCAA

U12 Branch Point Sequence:

TTGACCTGAATC

Flanking Amino Acid:

TTAAATSTATSTSASSFALN

Intron Amino Acid Position:

342

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.9

80.8

33.6

Major BPS

77.9

0.69

0.8

77.9

25.8

Major PPT

89.9

0.9

0.6

88.2

21.5

Minor 5ss

36.8

-1.5

2.7

42.7

38.3

Minor BPS

65.5

0.47

1.5

72.2

38.9

Associated Gene:

Gene:

NUP62

Ensembl Gene ID:

ENSAPLG00000008575

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045508

10083388 - 10095105

11718

ENSAPLT00000008938

10084171 - 10094737

10567