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Intron Name: Anas_platyrhynchos_platyrhynchos_10_10089906_10090233_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10089906 - 10090233

Intron Length:

328

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGTGA

5'SS Class:

strong_major

3'SS Sequence:

CTTCTGCTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTATAAT

U12 Branch Point Sequence:

TTCTGCTTACAG

Flanking Amino Acid:

DRTLIENGEKITSLHREVEK

Intron Amino Acid Position:

425

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.2

0.93

0.9

75.7

36.7

Major BPS

70.1

0.5

1.3

72.3

40.4

Major PPT

82.5

0.73

0.8

75.8

32.8

Minor 5ss

36.1

-1.6

3.3

47.1

48.3

Minor BPS

48.4

-0.2

2.2

60.06

47.5

Associated Gene:

Gene:

NUP62

Ensembl Gene ID:

ENSAPLG00000008575

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008938

10084171 - 10094737

10567

ENSAPLT00000045508

10083388 - 10095105

11718