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Intron Name: Anas_platyrhynchos_platyrhynchos_10_10090284_10090414_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10090284 - 10090414

Intron Length:

131

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGAAAC

5'SS Class:

strong_major

3'SS Sequence:

TTTCTCTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

CTGTTTTAAATT

Flanking Amino Acid:

EVEKVKLDQKRLDQELDFIL

Intron Amino Acid Position:

441

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.1

0.9

0.8

80.3

26.9

Major BPS

90.4

0.7

90.2

19.3

Major PPT

93.6

0.98

0.6

92.4

17.8

Minor 5ss

28.3

-2.5

2.8

33.7

41.9

Minor BPS

55.8

0.26

1.7

70.08

42.4

Associated Gene:

Gene:

NUP62

Ensembl Gene ID:

ENSAPLG00000008575

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045508

10083388 - 10095105

11718

ENSAPLT00000008938

10084171 - 10094737

10567