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Intron Name: Anas_platyrhynchos_platyrhynchos_10_10090550_10091248_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10090550 - 10091248

Intron Length:

699

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAC|GTAAGACAA

5'SS Class:

major

3'SS Sequence:

GTGCATTTCGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTAAAT

U12 Branch Point Sequence:

ATGTTCTGACCT

Flanking Amino Acid:

LQHADEERERTYKLAENIDA

Intron Amino Acid Position:

486

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.4

0.55

1.3

67.8

39.3

Major BPS

82.3

0.8

0.9

87.6

25.7

Major PPT

71.4

0.48

40.9

Minor 5ss

32.7

-2

3.1

38.6

39.8

Minor BPS

56.4

0.28

1.8

74.69

42.2

Associated Gene:

Gene:

NUP62

Ensembl Gene ID:

ENSAPLG00000008575

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045508

10083388 - 10095105

11718

ENSAPLT00000008938

10084171 - 10094737

10567