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Intron Name: Anas_platyrhynchos_platyrhynchos_10_10109349_10109543_F


Intron Information:

Intron Rank:
16

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
10109349 - 10109543

Intron Length:
195

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GCA|GTGAGTATA

5'SS Class:
major

3'SS Sequence:
TTCTGTGTTCTAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
AAGAAAC

U12 Branch Point Sequence:
CAAGAAGAAACT

Flanking Amino Acid:
SPRYRLKCRKQEQSGGEKRR

Intron Amino Acid Position:
788

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
75.2
0.6
1
77.2
32.8

Major BPS
46.3
-0.2
1
48.7
32

Major PPT
76.7
0.6
0.9
69.1
41.8

Minor 5ss
36.1
-1.6
2.9
47.9
41.8

Minor BPS
34
-1.1
2.3
47.79
44.2

Associated Gene:

Gene:
MORC4

Ensembl Gene ID:

Chromosome:
10

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

10099862 - 10114359
14498

10096054 - 10114359
18306