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Intron Name: Anas_platyrhynchos_platyrhynchos_10_10145386_10145596_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10145386 - 10145596

Intron Length:

211

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACCCGTG

5'SS Class:

major

3'SS Sequence:

TCTCCCTGCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACCTGAT

U12 Branch Point Sequence:

TGCACCTGATTC

Flanking Amino Acid:

PLFQGRRALARIVRLVLVLR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.9

0.38

1.3

58.2

46.8

Major BPS

0.5

59.3

39.1

Major PPT

72.2

0.5

0.9

64.7

36.4

Minor 5ss

44.4

-0.6

3.5

64.2

47.3

Minor BPS

-0.1

1.7

56.81

41.8

Associated Gene:

Gene:

CNGA2

Ensembl Gene ID:

ENSAPLG00000009170

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009546

10145096 - 10150769

5674

ENSAPLT00000036014

10145080 - 10150769

5690