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Intron Name: Anas_platyrhynchos_platyrhynchos_10_10148156_10148587_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10148156 - 10148587

Intron Length:

432

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGCTCG

5'SS Class:

strong_major

3'SS Sequence:

GGTCCTCTTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTGTAT

U12 Branch Point Sequence:

CTGGTCTCACTG

Flanking Amino Acid:

VLYNWCLLVARACFSDLQKT

Intron Amino Acid Position:

190

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.1

0.9

72.3

40.1

Major BPS

62.7

0.32

1.4

63.4

Major PPT

75.7

0.58

0.9

65.6

Minor 5ss

44.2

-0.6

2.8

56.7

47.6

Minor BPS

-0.7

1.9

41.93

Associated Gene:

Gene:

CNGA2

Ensembl Gene ID:

ENSAPLG00000009170

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036014

10145080 - 10150769

5690

ENSAPLT00000009546

10145096 - 10150769

5674