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Intron Name: Anas_platyrhynchos_platyrhynchos_10_10204133_10205510_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10204133 - 10205510

Intron Length:

1378

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGCAA

5'SS Class:

strong_major

3'SS Sequence:

CCCTTTTTCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCCAAT

U12 Branch Point Sequence:

GTGACTCCAATG

Flanking Amino Acid:

NTSEVLRTGAGEYMVMTVSF

Intron Amino Acid Position:

228

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.5

0.81

0.9

70.9

36.4

Major BPS

59.5

0.24

1.3

68.4

35.9

Major PPT

0.63

0.7

71.8

32.7

Minor 5ss

24.6

-2.9

28.8

43.6

Minor BPS

43.1

-0.6

1.8

45.83

40.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000009273

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042616

10201399 - 10229302

27904

ENSAPLT00000036061

10201399 - 10229302

27904

ENSAPLT00000009709

10201399 - 10243694

42296