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Intron Name: Anas_platyrhynchos_platyrhynchos_10_10301533_10304864_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

10301533 - 10304864

Intron Length:

3332

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGGTGG

5'SS Class:

major

3'SS Sequence:

CCAAATGCACCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CCCAAAT

U12 Branch Point Sequence:

TTTTCCCCAAAT

Flanking Amino Acid:

VLLSALPADAGLSQKHVSDV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.1

0.66

1.1

61.3

45.8

Major BPS

52.4

0.06

1.1

58.8

34.5

Major PPT

53.2

0.07

1.1

43.6

41.7

Minor 5ss

35.7

-1.6

3.2

38.2

46.7

Minor BPS

61.5

0.44

37.9

Associated Gene:

Gene:

GABRA3

Ensembl Gene ID:

ENSAPLG00000010123

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039742

10247443 - 10332324

84882

ENSAPLT00000024246

10253890 - 10339984

86095

ENSAPLT00000010558

10253922 - 10330505

76584