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Intron Name: Anas_platyrhynchos_platyrhynchos_10_10484728_10490133_R

Intron Information:

Intron Rank:

140501

Intron Class:

major

Intron Phase:

Intron Coordinates:

10484728 - 10490133

Intron Length:

5406

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACT|GTAAGTAGA

5'SS Class:

major

3'SS Sequence:

TTCTTTCTTCTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCTTAAT

U12 Branch Point Sequence:

TGAGCATTATTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.1

0.59

1.1

71.3

40.3

Major BPS

74.6

0.61

1.1

75.5

35.1

Major PPT

87.3

0.84

0.6

81.2

30.9

Minor 5ss

-1.4

2.8

52.3

44.3

Minor BPS

48.3

-0

1.9

66.81

43.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022967

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043158

10484715 - 10530300

45586