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Intron Name: Anas_platyrhynchos_platyrhynchos_10_10489396_10490133_R

Intron Information:

Intron Rank:

140500

Intron Class:

major

Intron Phase:

Intron Coordinates:

10489396 - 10490133

Intron Length:

738

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACT|GTAAGTAGA

5'SS Class:

major

3'SS Sequence:

TTTCTTCCCCTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAGTAAC

U12 Branch Point Sequence:

TCACTAGTAACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.1

0.59

1.1

71.3

40.3

Major BPS

66.7

0.42

1.2

67.6

36.5

Major PPT

80.3

0.68

0.7

74.1

31.1

Minor 5ss

-1.4

2.8

52.3

44.3

Minor BPS

46.4

-0.1

2.2

66.99

43.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022967

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039679

10488888 - 10490428

1541