Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_10_11228344_11229165_F

Intron Information:

Intron Rank:

125455

Intron Class:

major

Intron Phase:

Intron Coordinates:

11228344 - 11229165

Intron Length:

822

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTTATGTT

5'SS Class:

major

3'SS Sequence:

TTCCCCCATACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAC

U12 Branch Point Sequence:

TGTTTCTAACTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.5

0.44

1.2

72.4

36.9

Major BPS

84.6

0.86

0.8

83.9

22.3

Major PPT

75.4

0.57

0.8

69.2

30.4

Minor 5ss

40.4

-1.1

3.2

58.6

Minor BPS

54.2

0.21

1.9

75.64

41.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017601

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017221

11227328 - 11230010

2683