Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_10_11294437_11386125_R

Intron Information:

Intron Rank:

149653

Intron Class:

major

Intron Phase:

Intron Coordinates:

11294437 - 11386125

Intron Length:

91689

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCT|GTAAGTTGC

5'SS Class:

major

3'SS Sequence:

TTGTGTATTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATAACAT

U12 Branch Point Sequence:

TCACAAATAACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.8

0.56

1.1

66.5

40.1

Major BPS

62.2

0.3

1.1

69.4

35.8

Major PPT

79.9

0.67

0.9

74.1

40.3

Minor 5ss

43.5

-0.7

2.8

62.6

Minor BPS

44.9

-0.3

57.56

40.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028045

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024624

11294042 - 11410382

116341