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Intron Name: Anas_platyrhynchos_platyrhynchos_10_11456364_11465402_F

Intron Information:

Intron Rank:

134939

Intron Class:

major

Intron Phase:

Intron Coordinates:

11456364 - 11465402

Intron Length:

9039

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATTTCT

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTCCTCTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GACTCAT

U12 Branch Point Sequence:

ACTTGGGTAAAA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.87

0.9

83.3

Major BPS

69.4

0.48

1.2

71.6

36.4

Major PPT

85.2

0.79

0.6

78.4

30.4

Minor 5ss

42.9

-0.8

2.8

44.3

Minor BPS

38.6

-0.8

2.7

54.26

44.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022588

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040629

11455902 - 11465539

9638