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Intron Name: Anas_platyrhynchos_platyrhynchos_10_11539845_11541634_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11539845 - 11541634

Intron Length:

1790

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAC|GTGAGTCCT

5'SS Class:

major

3'SS Sequence:

TTTCTCCCTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTGAT

U12 Branch Point Sequence:

ACCCCCCCAATT

Flanking Amino Acid:

QDEKYYQICETVLKEVYAAF

Intron Amino Acid Position:

237

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.2

0.57

1.3

71.4

40.3

Major BPS

0.85

0.9

39.9

Major PPT

0.83

0.7

81.7

23.1

Minor 5ss

32.8

-2

2.9

37.6

Minor BPS

46.5

-0.1

1.9

60.85

42.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006408

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040921

11535246 - 11547426

12181

ENSAPLT00000006650

11536150 - 11547426

11277