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Intron Name: Anas_platyrhynchos_platyrhynchos_10_11541744_11542134_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11541744 - 11542134

Intron Length:

391

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CAG|GCAAGTTGA

5'SS Class:

strong_major

3'SS Sequence:

TTCTGCTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGGTTAA

U12 Branch Point Sequence:

CCTTGGTTAACC

Flanking Amino Acid:

LHKFSPGFFPGTGDVTDVGL

Intron Amino Acid Position:

201

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

97.4

1.12

0.8

76.1

39.3

Major BPS

0.17

1.3

49.4

Major PPT

86.7

0.83

0.7

84.4

30.6

Minor 5ss

29.2

-2.4

3.8

40.8

45.4

Minor BPS

49.4

-0

2.4

65.55

46.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006408

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006650

11536150 - 11547426

11277

ENSAPLT00000040921

11535246 - 11547426

12181