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Intron Name: Anas_platyrhynchos_platyrhynchos_10_11542213_11543164_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11542213 - 11543164

Intron Length:

952

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGGGAT

5'SS Class:

strong_major

3'SS Sequence:

CCTCTTCTGCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGAAAAT

U12 Branch Point Sequence:

AATGCTTGAAAG

Flanking Amino Acid:

YIDLDLHHGDGVEDAFSFTS

Intron Amino Acid Position:

175

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.1

0.78

0.9

74.8

35.1

Major BPS

55.4

0.14

1.3

61.7

41.5

Major PPT

74.6

0.55

0.9

68.5

37.3

Minor 5ss

-2.2

3.6

43.1

45.5

Minor BPS

48.5

-0.2

1.7

53.25

41.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006408

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040921

11535246 - 11547426

12181

ENSAPLT00000006650

11536150 - 11547426

11277