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Intron Name: Anas_platyrhynchos_platyrhynchos_10_11546247_11547174_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11546247 - 11547174

Intron Length:

928

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTGAGTGTC

5'SS Class:

strong_major

3'SS Sequence:

CCCTCCCTGCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAC

U12 Branch Point Sequence:

GGTGTTTTGACT

Flanking Amino Acid:

IEAYSLLEHMMIVKPKVATM

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.7

0.72

77.8

30.2

Major BPS

86.5

0.91

0.8

77.4

37.4

Major PPT

0.32

0.9

57.5

33.3

Minor 5ss

34.2

-1.8

3.4

41.4

Minor BPS

59.4

0.38

1.4

71.63

39.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006408

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040921

11535246 - 11547426

12181

ENSAPLT00000006650

11536150 - 11547426

11277