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Intron Name: Anas_platyrhynchos_platyrhynchos_10_11549996_11551296_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11549996 - 11551296

Intron Length:

1301

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGGCG

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTCCCCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTGAT

U12 Branch Point Sequence:

CACGGTTTGATT

Flanking Amino Acid:

IVRLKSEIKQPISLQSGDGD

Intron Amino Acid Position:

984

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.5

0.79

0.9

66.5

39.1

Major BPS

78.6

0.71

1.2

71.4

45.1

Major PPT

84.9

0.78

0.7

77.7

Minor 5ss

24.1

-3

3.2

29.4

43.5

Minor BPS

44.9

-0.3

1.8

54.29

42.7

Associated Gene:

Gene:

PHKA1

Ensembl Gene ID:

ENSAPLG00000005017

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029202

11547621 - 11561933

14313