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Intron Name: Anas_platyrhynchos_platyrhynchos_10_11553797_11555559_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11553797 - 11555559

Intron Length:

1763

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGGTCT

5'SS Class:

strong_major

3'SS Sequence:

CCTCCCGTTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGCTGAA

U12 Branch Point Sequence:

GGTGGCTGAAGC

Flanking Amino Acid:

HLSFMDPGPEADTFDEVAQY

Intron Amino Acid Position:

625

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.3

0.74

73.1

38.8

Major BPS

49.7

-0

1.3

43.1

41.8

Major PPT

75.1

0.57

0.9

68.2

31.9

Minor 5ss

38.9

-1.2

3.3

48.7

Minor BPS

43.2

-0.5

2.2

52.58

44.5

Associated Gene:

Gene:

PHKA1

Ensembl Gene ID:

ENSAPLG00000005017

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028783

11547621 - 11561933

14313

ENSAPLT00000019942

11547621 - 11561933

14313

ENSAPLT00000005286

11547621 - 11561933

14313

ENSAPLT00000038973

11547621 - 11561933

14313

ENSAPLT00000029202

11547621 - 11561933

14313