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Intron Name: Anas_platyrhynchos_platyrhynchos_10_11555903_11556472_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11555903 - 11556472

Intron Length:

570

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAGGGATC

5'SS Class:

major

3'SS Sequence:

TTGTCCCCACCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCCTGAC

U12 Branch Point Sequence:

TTGTCCCCACCA

Flanking Amino Acid:

ITFPISQTMLDETGSSVHPA

Intron Amino Acid Position:

572

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.5

0.58

1.1

69.6

41.1

Major BPS

51.1

0.03

1.2

39.9

Major PPT

71.4

0.48

0.9

64.1

37.9

Minor 5ss

35.6

-1.6

3.5

47.8

42.7

Minor BPS

48.6

-0.1

2.1

68.41

43.8

Associated Gene:

Gene:

PHKA1

Ensembl Gene ID:

ENSAPLG00000005017

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019942

11547621 - 11561933

14313

ENSAPLT00000005286

11547621 - 11561933

14313

ENSAPLT00000038973

11547621 - 11561933

14313

ENSAPLT00000029202

11547621 - 11561933

14313

ENSAPLT00000028783

11547621 - 11561933

14313