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Intron Name: Anas_platyrhynchos_platyrhynchos_10_11557625_11557823_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11557625 - 11557823

Intron Length:

199

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCCAA

5'SS Class:

strong_major

3'SS Sequence:

CCTCCCCCTGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTGAG

U12 Branch Point Sequence:

GAGCCCTGAGCC

Flanking Amino Acid:

TVPKPDVVVQVCILAETEGI

Intron Amino Acid Position:

442

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.1

0.8

0.9

70.2

37.7

Major BPS

-0.1

1.5

42.6

40.4

Major PPT

76.3

0.59

0.7

69.3

24.5

Minor 5ss

31.7

-2.1

37.9

46.9

Minor BPS

48.2

-0.1

1.7

55.49

41.8

Associated Gene:

Gene:

PHKA1

Ensembl Gene ID:

ENSAPLG00000005017

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029202

11547621 - 11561933

14313

ENSAPLT00000028783

11547621 - 11561933

14313

ENSAPLT00000019942

11547621 - 11561933

14313

ENSAPLT00000038973

11547621 - 11561933

14313

ENSAPLT00000005286

11547621 - 11561933

14313

ENSAPLT00000032389

11547621 - 11561933

14313