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Intron Name: Anas_platyrhynchos_platyrhynchos_10_11558946_11559165_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11558946 - 11559165

Intron Length:

220

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCGGC

5'SS Class:

strong_major

3'SS Sequence:

CCTCTCCTCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTCAC

U12 Branch Point Sequence:

TCCTGCTCACCA

Flanking Amino Acid:

TKQEIITKLQGRYGCCRFLR

Intron Amino Acid Position:

289

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.2

0.78

0.9

66.6

39.6

Major BPS

69.8

0.49

1.1

71.3

36.7

Major PPT

77.2

0.61

0.7

68.6

31.7

Minor 5ss

31.2

-2.1

3.3

41.1

45.6

Minor BPS

45.9

-0.3

2.2

58.78

Associated Gene:

Gene:

PHKA1

Ensembl Gene ID:

ENSAPLG00000005017

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028783

11547621 - 11561933

14313

ENSAPLT00000019942

11547621 - 11561933

14313

ENSAPLT00000038973

11547621 - 11561933

14313

ENSAPLT00000005286

11547621 - 11561933

14313

ENSAPLT00000032389

11547621 - 11561933

14313

ENSAPLT00000029202

11547621 - 11561933

14313