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Intron Name: Anas_platyrhynchos_platyrhynchos_10_11560454_11561247_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11560454 - 11561247

Intron Length:

794

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGGACG

5'SS Class:

major

3'SS Sequence:

TTCTCCTCTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GGCAGAA

U12 Branch Point Sequence:

CAGAACGGAGCT

Flanking Amino Acid:

DKAKAYELEQVDKVEAFKYS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.4

0.69

44.2

Major BPS

42.9

-0.4

1.2

32.4

34.9

Major PPT

85.1

0.79

0.7

77.2

31.5

Minor 5ss

31.2

-2.2

3.3

39.9

45.9

Minor BPS

35.5

-1

2.2

47.89

Associated Gene:

Gene:

PHKA1

Ensembl Gene ID:

ENSAPLG00000005017

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019942

11547621 - 11561933

14313