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Intron Name: Anas_platyrhynchos_platyrhynchos_10_11580107_11580332_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

11580107 - 11580332

Intron Length:

226

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGGAG

5'SS Class:

strong_major

3'SS Sequence:

GGGCGCCCCGCAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CGAGCAT

U12 Branch Point Sequence:

TGCCCGAGCATT

Flanking Amino Acid:

KQEAELMARKCAMLNEKLDS

Intron Amino Acid Position:

304

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

69.1

37.5

Major BPS

44.4

-0.3

1.5

49.1

44.8

Major PPT

56.1

0.14

46.9

36.7

Minor 5ss

23.1

-3.1

3.2

27.7

44.2

Minor BPS

34.5

-1.1

2.4

51.83

42.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002561

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002574

11577699 - 11582124

4426