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Intron Name: Anas_platyrhynchos_platyrhynchos_10_11580571_11580788_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11580571 - 11580788

Intron Length:

218

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGGGG

5'SS Class:

strong_major

3'SS Sequence:

TGTTTGCACCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGCAC

U12 Branch Point Sequence:

GTGTTTGCACCC

Flanking Amino Acid:

LRQIIEQAEKAVDEQNKQTQ

Intron Amino Acid Position:

383

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

0.9

63.9

42.4

Major BPS

65.1

0.38

1.4

77.4

37.4

Major PPT

70.9

0.47

62.6

43.4

Minor 5ss

23.2

-3.1

3.2

28.7

43.7

Minor BPS

39.7

-0.8

2.2

50.02

41.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002561

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002574

11577699 - 11582124

4426