Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_10_11584687_11584775_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11584687 - 11584775

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGAGCCCC

5'SS Class:

major

3'SS Sequence:

GTCGTTTTGGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTGAG

U12 Branch Point Sequence:

CCCAGCTCACCC

Flanking Amino Acid:

ALTMKNLGGWTPTLEYYSGY

Intron Amino Acid Position:

308

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.2

0.55

1.1

56.7

42.7

Major BPS

60.1

0.25

1.6

60.7

45.9

Major PPT

72.1

0.5

1.1

68.5

42.1

Minor 5ss

33.3

-1.9

35.1

Minor BPS

39.2

-0.8

2.1

42.44

44.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002443

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047970

11584235 - 11586992

2758

ENSAPLT00000044171

11584235 - 11586992

2758

ENSAPLT00000002458

11584414 - 11587007

2594