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Intron Name: Anas_platyrhynchos_platyrhynchos_10_11586373_11586509_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11586373 - 11586509

Intron Length:

137

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTGAGTACC

5'SS Class:

strong_major

3'SS Sequence:

TTATCCCCTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTTAT

U12 Branch Point Sequence:

ACGTCCTTATCC

Flanking Amino Acid:

AAKNNEANLKKSLKKTPLTE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.1

0.76

0.9

77.7

30.1

Major BPS

78.8

0.72

67.9

40.1

Major PPT

79.7

0.67

0.8

70.8

35.8

Minor 5ss

33.3

-1.9

2.7

38.5

32.5

Minor BPS

64.9

0.45

1.6

68.47

43.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002443

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047970

11584235 - 11586992

2758

ENSAPLT00000002458

11584414 - 11587007

2594