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Intron Name: Anas_platyrhynchos_platyrhynchos_10_11592136_11592605_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11592136 - 11592605

Intron Length:

470

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGGGCA

5'SS Class:

strong_major

3'SS Sequence:

CTGTGCCCTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTCAC

U12 Branch Point Sequence:

TGCTGCTCACCT

Flanking Amino Acid:

TECTSPTAHLKLLAECQDQQ

Intron Amino Acid Position:

200

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

68.5

36.3

Major BPS

69.8

0.49

1.1

71.3

36.7

Major PPT

73.5

0.53

0.9

66.1

35.8

Minor 5ss

29.6

-2.3

3.5

35.6

42.2

Minor BPS

47.2

-0.1

2.2

68.65

47.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000001287

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019314

11589408 - 11594235

4828

ENSAPLT00000001312

11590408 - 11594235

3828