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Intron Name: Anas_platyrhynchos_platyrhynchos_10_11592806_11593838_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11592806 - 11593838

Intron Length:

1033

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTGAGTGGC

5'SS Class:

strong_major

3'SS Sequence:

TCCCCACACCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGACCAT

U12 Branch Point Sequence:

CTCCCCACACCC

Flanking Amino Acid:

AGMEASPELGGYLRKVLRNH

Intron Amino Acid Position:

133

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.7

0.72

Major BPS

50.4

0.01

1.4

60.8

45.4

Major PPT

63.6

0.31

0.9

54.5

34.4

Minor 5ss

28.1

-2.5

3.1

35.3

41.4

Minor BPS

42.7

-0.5

53.05

44.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000001287

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026372

11590408 - 11594215

3808

ENSAPLT00000019314

11589408 - 11594235

4828

ENSAPLT00000001312

11590408 - 11594235

3828