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Intron Name: Anas_platyrhynchos_platyrhynchos_10_11597977_11598180_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11597977 - 11598180

Intron Length:

204

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGTGC

5'SS Class:

strong_major

3'SS Sequence:

TTCTCTGCTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

GCCCTTTTATTT

Flanking Amino Acid:

KFNVTTVDMTRKPEELKDLA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.5

0.81

0.9

37.3

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

81.1

0.7

0.8

73.1

37.3

Minor 5ss

31.6

-2.1

3.2

41.1

45.6

Minor BPS

47.5

-0.1

1.5

56.7

40.9

Associated Gene:

Gene:

CLIC2

Ensembl Gene ID:

ENSAPLG00000000963

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038112

11597867 - 11599579

1713

ENSAPLT00000000954

11595459 - 11599199

3741