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Intron Name: Anas_platyrhynchos_platyrhynchos_10_11598630_11598750_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11598630 - 11598750

Intron Length:

121

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCA|GTAAGAAAA

5'SS Class:

major

3'SS Sequence:

GCTGCCCTCCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTGAC

U12 Branch Point Sequence:

ACGTGTTGACCC

Flanking Amino Acid:

IKNPRKEANSNLEKALLREF

Intron Amino Acid Position:

131

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.5

0.55

34.5

Major BPS

71.3

0.53

1.1

63.1

44.5

Major PPT

68.3

0.41

0.9

57.8

38.5

Minor 5ss

-1.7

46.1

42.9

Minor BPS

42.4

-0.6

48.63

41.9

Associated Gene:

Gene:

CLIC2

Ensembl Gene ID:

ENSAPLG00000000963

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038112

11597867 - 11599579

1713

ENSAPLT00000000954

11595459 - 11599199

3741