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Intron Name: Anas_platyrhynchos_platyrhynchos_10_11740001_11740532_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11740001 - 11740532

Intron Length:

532

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAGGCAGC

5'SS Class:

major

3'SS Sequence:

TCCCCTCTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAAGCAA

U12 Branch Point Sequence:

AGGTCGCTAAGC

Flanking Amino Acid:

YWEVVVGSSTWYAIGVAYKS

Intron Amino Acid Position:

554

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.3

0.5

1.1

59.8

45.2

Major BPS

48.5

-0

1.4

38.9

Major PPT

80.9

0.69

0.7

72.3

32.3

Minor 5ss

38.5

-1.3

3.2

48.4

42.9

Minor BPS

42.3

-0.6

2.4

54.07

43.6

Associated Gene:

Gene:

MID2

Ensembl Gene ID:

ENSAPLG00000015609

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016282

11696661 - 11741157

44497