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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_10_11751542_11751733_F

Intron Information:

Intron Rank:
147924
Intron Class:
major
Intron Phase:
Intron Coordinates:
11751542 - 11751733
Intron Length:
192

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
AAG|GTGAGTGAG
5'SS Class:
strong_major
3'SS Sequence:
ACTCCTTCTCCAG|G
3'SS Class:
major_PPT
U2 Branch Point Sequence:
CACTGAT
U12 Branch Point Sequence:
CGTTCCTGCACT
Flanking Amino Acid:
Intron Amino Acid Position:

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
90.5
0.96
0.8
77.5
32.9
Major BPS
71.2
0.53
1
61
37.5
Major PPT
78.6
0.64
0.8
69.6
36.1
Minor 5ss
26.6
-2.7
3
30.5
43.3
Minor BPS
58.9
0.36
2
77.65
44.4

Associated Gene:

Gene:
Ensembl Gene ID:
ENSAPLG00000029630
Chromosome:
10

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000021825
11751057 - 11753399
2343