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Intron Name: Anas_platyrhynchos_platyrhynchos_10_11790733_11796607_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11790733 - 11796607

Intron Length:

5875

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTATGTAGA

5'SS Class:

major

3'SS Sequence:

CTCCTGCTCGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTCAT

U12 Branch Point Sequence:

TCCCTCTCATTC

Flanking Amino Acid:

CGEKEEEAELATSNLDLESK

Intron Amino Acid Position:

123

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.6

0.67

70.6

41.3

Major BPS

82.6

0.81

0.9

83.3

27.7

Major PPT

74.2

0.54

0.8

68.1

Minor 5ss

40.7

-1

2.5

42.3

44.5

Minor BPS

45.2

-0.3

1.7

40.6

Associated Gene:

Gene:

NHSL2

Ensembl Gene ID:

ENSAPLG00000022721

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030629

11790366 - 11804787

14422

ENSAPLT00000020624

11790366 - 11805182

14817