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Intron Name: Anas_platyrhynchos_platyrhynchos_10_11798737_11799350_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11798737 - 11799350

Intron Length:

614

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGACAGCA

5'SS Class:

major

3'SS Sequence:

TCTGTCCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTCAC

U12 Branch Point Sequence:

CCCTGCTCACCC

Flanking Amino Acid:

GFPNMSLRDQGSANGPAPTT

Intron Amino Acid Position:

331

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.7

0.54

1.1

64.8

35.2

Major BPS

69.8

0.49

1.1

71.3

36.7

Major PPT

75.7

0.58

0.8

69.7

31.1

Minor 5ss

30.8

-2.2

3.3

39.5

45.9

Minor BPS

42.8

-0.5

2.2

49.59

47.1

Associated Gene:

Gene:

NHSL2

Ensembl Gene ID:

ENSAPLG00000022721

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021795

11779864 - 11804787

24924

ENSAPLT00000021412

11785296 - 11804787

19492

ENSAPLT00000020624

11790366 - 11805182

14817

ENSAPLT00000030629

11790366 - 11804787

14422