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Intron Name: Anas_platyrhynchos_platyrhynchos_10_11802019_11804243_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11802019 - 11804243

Intron Length:

2225

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTGAGTCCC

5'SS Class:

major

3'SS Sequence:

GCTGCGTTGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCTCAG

U12 Branch Point Sequence:

TCGGTCTCAGGG

Flanking Amino Acid:

SPVKTSGSPTSGESGEGKAQ

Intron Amino Acid Position:

1115

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.4

0.69

0.9

68.6

36.4

Major BPS

53.2

0.08

1.7

65.3

43.7

Major PPT

62.8

0.29

1.1

57.1

43.3

Minor 5ss

31.8

-2.1

2.8

37.4

33.2

Minor BPS

38.8

-0.9

38.19

45.2

Associated Gene:

Gene:

NHSL2

Ensembl Gene ID:

ENSAPLG00000022721

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020624

11790366 - 11805182

14817