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Intron Name: Anas_platyrhynchos_platyrhynchos_10_11809051_11809143_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11809051 - 11809143

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTAAGGCCG

5'SS Class:

major

3'SS Sequence:

TCTGCCCCCGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGTAAC

U12 Branch Point Sequence:

GGGGCTGTAACC

Flanking Amino Acid:

DDNNVTATMIATLFTSLLLR

Intron Amino Acid Position:

149

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.3

0.64

1.1

58.3

46.2

Major BPS

62.2

0.3

1.2

38.7

Major PPT

72.5

0.51

0.8

65.9

30.2

Minor 5ss

31.6

-2.1

3.3

40.9

44.9

Minor BPS

46.9

-0.2

2.1

55.18

43.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020162

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040424

11808926 - 11814493

5568