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Intron Name: Anas_platyrhynchos_platyrhynchos_10_11810911_11814454_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

11810911 - 11814454

Intron Length:

3544

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GAT|GCCATCCCT

5'SS Class:

weak_major

3'SS Sequence:

CCTCAACAGTGAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TCCTCAA

U12 Branch Point Sequence:

GCATCCTCAACA

Flanking Amino Acid:

ILQLVQVPLDDAGEMPLQVP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

52.7

0.06

1.4

56.3

42.2

Major BPS

73.1

0.58

73.8

32.3

Major PPT

44.3

-0.3

1.7

47.4

39.5

Minor 5ss

28.1

-2.5

45.6

42.2

Minor BPS

65.9

0.5

1.6

69.69

42.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020162

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040424

11808926 - 11814493

5568