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Intron Name: Anas_platyrhynchos_platyrhynchos_10_1181542_1183139_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1181542 - 1183139

Intron Length:

1598

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGAGTGTC

5'SS Class:

strong_major

3'SS Sequence:

TCTGCCCGCCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

TCATCCATCACC

Flanking Amino Acid:

SMKIVMKVGQDPNAVVPEQL

Intron Amino Acid Position:

194

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.78

0.9

75.7

34.4

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

66.6

0.37

57.8

38.5

Minor 5ss

31.4

-2.1

3.2

35.2

41.4

Minor BPS

54.1

0.11

2.1

68.14

43.1

Associated Gene:

Gene:

EFNB1

Ensembl Gene ID:

ENSAPLG00000027844

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022343

1180169 - 1191772

11604