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Intron Name: Anas_platyrhynchos_platyrhynchos_10_11820396_11820517_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

11820396 - 11820517

Intron Length:

122

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAGGCAGT

5'SS Class:

major

3'SS Sequence:

CACCGAGAGAGAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ATTTCAC

U12 Branch Point Sequence:

CCTTCCAAGATT

Flanking Amino Acid:

REPPPPPVPPKSASREQPKV

Intron Amino Acid Position:

104

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.4

0.48

1.1

66.4

45.1

Major BPS

81.3

0.78

0.8

83.4

26.1

Major PPT

39.6

-0.6

1.6

30.6

34.6

Minor 5ss

41.4

-1

3.2

Minor BPS

48.2

-0

67.34

44.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014140

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045900

11818905 - 11831431

12527