Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_10_11820403_11820500_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11820403 - 11820500

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCA|GTAAGTACC

5'SS Class:

major

3'SS Sequence:

GCTTCCTTCCAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

CCAGTTTTAATT

Flanking Amino Acid:

PPPPPVPPSRQFHRERESAS

Intron Amino Acid Position:

113

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.1

0.64

72.9

36.6

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

65.9

0.36

63.5

37.2

Minor 5ss

39.2

-1.2

2.7

37.4

Minor BPS

55.2

0.24

1.4

62.98

42.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014140

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014793

11818905 - 11831431

12527