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Intron Name: Anas_platyrhynchos_platyrhynchos_10_11823284_11823424_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11823284 - 11823424

Intron Length:

141

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGTCAC

5'SS Class:

strong_major

3'SS Sequence:

CTGCTCTCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTAAC

U12 Branch Point Sequence:

TCTCCTCTAACC

Flanking Amino Acid:

SVGTGIMGKMGNKGGVAVRF

Intron Amino Acid Position:

279

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.5

0.77

0.9

70.2

35.9

Major BPS

72.3

0.55

73.3

28.9

Major PPT

73.7

0.53

0.8

65.3

36.2

Minor 5ss

29.2

-2.4

2.8

32.4

36.1

Minor BPS

62.1

0.36

1.7

72.58

38.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014140

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014793

11818905 - 11831431

12527

ENSAPLT00000045900

11818905 - 11831431

12527