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Intron Name: Anas_platyrhynchos_platyrhynchos_10_11823613_11825119_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11823613 - 11825119

Intron Length:

1507

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGA|GTAAGTTTC

5'SS Class:

major

3'SS Sequence:

TCTTTGTTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTTCT

U12 Branch Point Sequence:

TTGTCTTTGTTT

Flanking Amino Acid:

TLPQLNIMKHDVVIWLGDLN

Intron Amino Acid Position:

341

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.9

0.66

34.8

Major BPS

36.2

-0.8

4.3

65.7

43.2

Major PPT

89.8

0.89

0.7

87.9

29.4

Minor 5ss

-0.4

2.7

58.2

40.5

Minor BPS

46.6

-0.1

3.4

78.01

39.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014140

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045900

11818905 - 11831431

12527

ENSAPLT00000014793

11818905 - 11831431

12527