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Intron Name: Anas_platyrhynchos_platyrhynchos_10_11838239_11839517_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11838239 - 11839517

Intron Length:

1279

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCGCC

5'SS Class:

strong_major

3'SS Sequence:

CATCCGCCCCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTCCAT

U12 Branch Point Sequence:

GAGCCCTCACCC

Flanking Amino Acid:

ASDKEPCHRKLSLQRSSSFK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

0.9

69.3

35.8

Major BPS

64.7

0.37

1.3

74.7

Major PPT

64.9

0.34

0.9

54.3

36.2

Minor 5ss

32.2

-2

3.3

41.8

45.1

Minor BPS

47.2

-0.2

1.8

54.49

42.8

Associated Gene:

Gene:

SASH3

Ensembl Gene ID:

ENSAPLG00000019773

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044211

11837148 - 11842048

4901