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Intron Name: Anas_platyrhynchos_platyrhynchos_10_11914567_11915578_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11914567 - 11915578

Intron Length:

1012

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAACAAA

5'SS Class:

major

3'SS Sequence:

TTTAATTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TGTGTTTTAATT

Flanking Amino Acid:

GLRQCLVTHNGKLLGIITKK

Intron Amino Acid Position:

797

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.52

1.1

67.5

39.6

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

87.3

0.84

0.8

84.9

35.2

Minor 5ss

37.6

-1.4

2.9

39.7

46.1

Minor BPS

68.4

0.66

1.3

79.54

37.3

Associated Gene:

Gene:

CLCN5

Ensembl Gene ID:

ENSAPLG00000011775

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041032

11914476 - 11954521

40046

ENSAPLT00000038268

11914476 - 11954006

39531

ENSAPLT00000021705

11914476 - 11956536

42061

ENSAPLT00000012290

11914476 - 11941754

27279