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Intron Name: Anas_platyrhynchos_platyrhynchos_10_11926382_11928458_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11926382 - 11928458

Intron Length:

2077

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAACATTT

5'SS Class:

strong_major

3'SS Sequence:

TTAATTCTTCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTTTTTAATT

Flanking Amino Acid:

KSRDRDRHREITSRSKESTW

Intron Amino Acid Position:

117

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.7

0.72

1.1

81.6

33.2

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

78.1

0.63

0.9

70.5

40.9

Minor 5ss

49.4

-0

2.9

73.9

42.6

Minor BPS

84.9

1.17

0.8

94.97

24.6

Associated Gene:

Gene:

CLCN5

Ensembl Gene ID:

ENSAPLG00000011775

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021705

11914476 - 11956536

42061

ENSAPLT00000012290

11914476 - 11941754

27279

ENSAPLT00000041032

11914476 - 11954521

40046

ENSAPLT00000038268

11914476 - 11954006

39531